MS Resources

Spectral Libraries

Our consensus spectral libraries are built using SpectraST, a free tool available as part of the Trans-Proteomic Pipeline (TPP). The current version contains spectra for Ubiquitin, NEDD8, SUMO-1, SUMO-2, SUMO-3, ATG8, FAT10 and ISG15. Spectra matching chain linkages listed below are also provided in this zip file. Our perfered SpectraST parameters are provided here.

Protein Modified Lysines in library
Ubiquitin K11, K48, K63
NEDD8 K22, K48
SUMO-1 K7, K17
SUMO-2 K11
SUMO-3 K11