MS Resources
Spectral Libraries
Our consensus spectral libraries are built using SpectraST, a free tool available as part of the Trans-Proteomic Pipeline (TPP). The current version contains spectra for Ubiquitin, NEDD8, SUMO-1, SUMO-2, SUMO-3, ATG8, FAT10 and ISG15. Spectra matching chain linkages listed below are also provided in this zip file. Our perfered SpectraST parameters are provided here.| Protein | Modified Lysines in library |
|---|---|
| Ubiquitin | K11, K48, K63 |
| NEDD8 | K22, K48 |
| SUMO-1 | K7, K17 |
| SUMO-2 | K11 |
| SUMO-3 | K11 |
